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List of Publications(Before 2015)  

2015
Chiba, S., Suzuki, N.* 2015. Highly activated RNA silencing via strong induction of dicer by one virus can interfere with the replication of an unrelated virus. Proceedings of the National Academy of Sciences 112, 4911-4918.

Miyazaki, N.*, Salaipeth, L., Kanematsu, S., Iwasaki, K., Suzuki, N.* 2015. Megabirnavirus structure reveals a putative 120-subunit capsid formed by asymmetric dimers with distinctive large protrusions. Journal of General Virology 96: 2435-2441

Eusebio-Cope, A., Suzuki, N.* 2015. Mycoreovirus genome rearrangements associated with RNA silencing deficiency. Nucleic acids research 43, 3802-3813.

Suzuki, N., Sasaya, T., Choi, I. R. 2015. e-Book on viruses threatening stable production of cereal crops. Frontiers in Microbiology, 6, 470.

Ghabrial, S. A.*, Caston, J. R., Jiang, D., Nibert, M. L., Suzuki, N. 2015. 50-plus years of fungal viruses. Virology 479, 356-368 (60th Anniversary Issue).


Eusebio-Cope, A., Sun, L., Tanaka,T., Chiba, S., Kasahara, S., Suzuki, N.* 2015. The chestnut blight fungus for studies on virus/host and virus/virus interactions: from a natural to a model host. Virology 477, 164-175(cover featuring).

Hyodo, K., Taniguchi, T., Manabe, Y., Kaido, M., Mise, K., Sugawara, T., Tanigushi, H., Okuno, T*. 2015. Phosphatidic acid produced by phospholipase D promotes RNA replication of a plant RNA virus. PLoS Pathogens 11(5): e1004909.

Andika, I.B.*, Maruyama, K., Sun, L., Kondo, H.*, Tamada, T., Suzuk, N.* 2015. Differential contributions of plant Dicer-like proteins to antiviral defenses against potato virus X in shoots and roots. The Plant Journal 81:1781-1793.

Andika, I.B.*., Maruyama, K., Sun, L., Kondo, H., Tamada, T., Suzuk, N. 2015. Different Dicer-like protein components required for intracellular and systemic antiviral silencing in Arabidopsis thaliana. Plant Signaling & Behavior 10:8, e1039214.

Kondo, H.*, Chiba, S., Suzuk, N. Detection and analysis of non-retroviral RNA virus-like elements in plant, fungal, and insect genomes. Methods in Molecular Biology1236, 73-85

Kondo, H.*, Takemoto, S., Maruyama, K., Chiba, S., Andika, I. B., Suzuki, N. 2015. Cymbidium chlorotic mosaic virus, a new sobemovirus isolated from a spring orchid (Cymbidium goeringii) in Japan. Archives of Virology 160, 2099-2104.
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2014
Zhang, R., Liu, S., Chiba, S., Kondo, H., Kanematsu, S. and Suzuki, N.* A novel single-stranded RNA virus isolated from a phytopathogenic filamentous fungus, Rosellinia necatrix, with similarity to hypo-like viruses. Frontiers in Virology 5:360. doi: 10.3389/fmicb.2014.00360

Salaipeth, L., Chiba, S., Eusebio-Cope, A., Kanematsu,S. and Suzuki, N.* 2014. Biological properties and expression strategy of Rosellinia necatrix megabirnavirus 1 analyzed in an experimental host, Cryphonectria parasitica. Journal of General Virology 95, 740-750

Kanematsu, S.*, Shimizu, T., Salaipeth, L., Yaegashi, H., Sasaki, A. and Suzuki, N. 2014. Genome rearrangement of a mycovirus Rosellinia necatrix megabirnavirus 1 affecting its ability to attenuate virulence of the host fungus. Virology 450-451, 308-315 (Highlighted-Article)

Nibert, M. L.*, Ghabrial, S. A., Maiss, E., Lesker, T., Vainio, E. J., Jiang, D., & Suzuk, N. 2014. Taxonomic reorganization of family Partitiviridae and other recent progress in partitivirus research. Virus Research 188, 128-141 .

Kondo, H.*, Maruyama, K., Chiba, S., Andika, I. B. and Suzuk, N. 2014. Transcriptional mapping of the messenger and leader RNAs of orchid fleck virus, a bisegmented negative-strand RNA virus. Virology 452-453, 166-174.

Kondo, H.*, Maeda, T., Gara, I.W., Chiba, S.,Maruyama, K Tamada, T. and Suzuk, N. 2014. Complete genome sequence of Habenaria mosaic virus, a new potyvirus species infecting a terrestrial orchid (Habenaria radiata) in Japan. Archive of Virology 159, 163-166

Dietzgen, R.G., Kuhn, J.H., Clawson, A.N., Freitas-Astua, J. Goodin, M.M., Kitajima, E.W., Kondo, H., Wetzel, T., Whitfield A.E. 2014. Dichoravirus - a proposed new genus for Brevipalpus mite-transmitted, nuclear, bacilliform, bipartite, negative-strand RNA plant viruses. Archive of Virology 159, 607-619


Matsushima, R., Maekawa, M., Miyako, K., Kondo, H., Fujita, N., Kawagoe, Y. and Sakamoto, W. 2014 Amyloplast-localized SUBSTANDARD STARCH GRAIN4 protein influences the size of starch grains in rice endosperm. Plant Physiology 164: 623-636.



2013
Chiba, S., Lin, Y-H., Kondo, H., Kanematsu, S. and Suzuki, N.* 2013. A novel victorivirus from a phytopathogenic fungus, Rosellinia necatrix is infectious as particles and targeted by RNA silencing. Journal of Virology 87:6727-6738 link (Spotlight Article)

Chiba, S., Lin, Y-H., Kondo, H., Kanematsu, S, and Suzuki, N.* 2013. Effects of defective-interfering RNA on symptom induction and replication of a novel partitivirus from a phytopathogenic fungus. Rosellinia necatrix. Journal of Virology 87, 2330-2341

Lin, Y-H., Hisano, S., Yaegashi, H., Kanematsu, S. and Suzuki, N.* 2013. A second quadrivirus strain from the phytopathogenic filamentous fungus Rosellinia necatrix. Achives of Virology 158, 1093-1098

Kondo, H., Kanematsu, S. and Suzuki N.*  2013. Viruses of the white root rot fungus, Rosellinia necatrix. Advances in Virus Research 86, 177-214

Kondo, H.*,Chiba,S., Toyoda, K. Suzui, N.* 2013. Evidence for negative-strand RNA virus infection in fungi. Virology 435,201-209 (Highlighted-Article)

Kondo, H.*, Chiba,S., Andika, I.B., Maruyama, K., Tamada, T. and Suzuk, N. 2013. Orchid fleck virus structural proteins, N and P, form intranuclear viroplasm-like structures in the absence of viral infection. Journal of Virology 87, 7423-7434

Kondo, H.*, Hirano, S., Chiba,S., Andika, I.B., Hirai, M., Maeda, T. and Tamada, T.* 2013. Characterization of burdock mottle virus, a novel member of the genus Benyvirus, and the identification of benyvirus-related sequences in the plant and insect genomes. Virus Research 177, 75-86 

Chiba, S., Hleibieh, K., Delbianco, A., Klein, E., Ratti, C., Ziegler-Graff, V., Bouzoubaa, S. and Gilmer, D.* 2013. The benyvirus RNA silencing suppressor is essential for long-distance movement, requires both Zn-finger and NoLS basic residues but not a nucleolar localization for its silencing suppression activity. Molecular Plant-Microbe Interactions 26,168-181

Andika, I.B., Zheng, S., Tan, Z., Sun, L., Kondo, H. and Chen, C. 2013. Endoplasmic reticulum export and vesicle formation of the movement protein of Chinese wheat mosaic virus are regulated by two transmembrane domains and dependent on the secretory pathway. Virology 435: 493-503.

Hiraguri, A., Ueki, S., Kondo, H., Nomiyama, K., Shimizu, T., Ichiki-Uehara, T., Omura, T., Sasaki, N., Nyunoya, H. and Sasaya, T. 2013. Identification of a movement protein of Mirafiori lettuce big-vein ophiovirus. Journal of General Virology 94: 1145-1150.

Sun, L., Andika, I.B., Kondo, H. and Chen, J.P. 2013. Identification of amino acid residues and domains in the cysteinerich protein of Chinese wheat mosaic virus that are important for RNA silencing suppression and subcellular 22 localization. Molecular Plant Pathology14: 265-278.

Sun, L., Jin, B., Andika, I.B., Hu, Y., Sun, B., Xiang, R., Kondo, H. and Chen, J.P. 2013. Nucleo-cytoplasmic shuttling of VPg encoded by Wheat yellow mosaic virus requires association with the coat protein. Journal of General Virology 94, 2790-2802.

Wang, S., Kondo, H., Liu, L., Guo, L. and Qiu, D. 2013. A novel mycovirus closely related to hypovirus isolated from the plant pathogenic fungus Fusarium graminearum. Virus Research 174: 69-77.


Tamada, T.* and Kondo, H. Biological and genetic diversity of plasmodiophorid-transmitted viruses and their vectors (REVIEW FOR THE 100TH ANNIVERSARY). Journal of General Plant Pathology 79, 307-320 (cover featuring).

Kuhn, J.H., Bekal, S., Cai, Y., Clawson, A.N., Domier, L.L., Herrel, M., Jahrling, P.B., Kondo, H., Lambert, K.N., Mihindukulasuriya, K.A., Nowotny, N., Radoshitzky, S.R., Schneider, U., Staeheli, P., Suzuki, N.., Tesh, R.B., Wang, D, Wang, L-F. and Dietzgen, R.G. 2013. Nyamiviridae: Proposal for a new family in the order Mononegavirales. Archives of Virology 158, 2209-2226.

Kondo, H. 2013. Plant rhabdoviruses with bipartite genomes. Uirusu 63(2):143-54.



2012
Lin, Y-H., Chiba,S., Tani, A., Kondo, H., Sasaki, A., Kanematsu, S., Suzuk., N.* 2012. A novel quadripartite dsRNA virus isolated from a phytopathogenic filamentous fungus, Rosellinia necatrix. Virology 426, 42-50.

Suzuki, N
.* 2012. Hypovirus cysteine proteases p29 and p48. Pp 2190-2193. In Handbook of Proteolytic Enzymes 3rd Edition. N Rawlings and G Salvesen (eds.). Elsevier, Oxford, UK.

Tanaka, T., Eusebio-Cope, A., Sun, L., Suzuki N.* 2012. Mycoreovirus genome alterations: similarities to and differences from rearrangements reported for other reoviruses (Review Article). Frontiers in Virology 3, 186.

Andika, I. B., Kondo, H.*, Nishiguchi, M. and Tamada, T. 2012. The cysteine-rich proteins of Beet necrotic yellow vein virus and Tobacco rattle virus contribute to efficient suppression of silencing in roots. Journal of General Virology 93:1841-1850


2011
Chiba, S., Kondo., H., Tani, A., Saisho, D., Sakamoto, W., Kanematsu, S. and Suzuki N.* 2011. Widespread endogenization of genome sequences of non-retroviral RNA viruses into plant genomes. PLoS Pathogens 7(7), e1002146. (Featured Research)

Tanaka, T., Sun, L., Tsutani, K., and Suzuki, N.* 2011. Rearrangements of Mycoreovirus 1 S1, S2, and S3 induced by a multifunctional protein p29 encoded by the prototypic hypovirus CHV1-EP713. Journal of General Virology 92,1949-1959.

Pu, Y., Kikuchi, A., Moriyasu, Y., Tomaru, M., Jin, Y., Suga, H., Hagiwara, K., Akita, F., Shimizu, T., Netsu, O., Suzuki, N., Uehara-Ichiki, T., Sasaya, T., Wei, T., Li, Y., and Omura, T. 2011. Rice dwarf viruses with dysfunctional genomes generated in plants are filtered out in vector insects -implications for the virus origin. Journal of Virology 85, 2975-2979.

Suzuki, N.*, and Kanematsu, S. 2011.The genus Mycoreovirus In The Springer Index of Viruses, 2nd Edition C. Tidona, C. Buchen-Osmond, G. Darai (eds.) Springer, Heidelberg, Germany ISBN13978-0-387-95918-4

Attoui, H. and 32 authors. 2011. Family Reoviridae. p. 541-637 637e1-e17 in: Virus Taxonomy: Ninth Report of the International Committee for the Taxonomy of Viruses. A. M. Q. King et al., eds. Elsevier, Academic Press, NY.

Chiba, S., Kondo, H., Miyanishi, M., Andika, I. B. Han, C. G. and Tamada, T. 2011. The evolutionary history of Beet necrotic yellow vein virus deduced from genetic variation, geographical origin and spread, and the breaking of host resistance. Molecular Plant-Microbe Interactions.24, 207-218. link.

Gibbs, A. J., Torronen, M., Mackenzie, A. M., Wood, J. T., Armstrong, J. S., Kondo, H., Tamada, T. and Keese, P. L. 2011. The enigmatic genome of Chara australis virus. Journal of General Virology 92,2679-2690.link 


2010
Chiba, S., Kondo, H., Kanematsu, S., and Suzuki, N. 2010. Virocontrol and mycoviruses. Uirus 60, 163-176 Supplementary material 


Eusebio-Cope, A., Sun, L.-Y., Hillman, B. I. and Suzuki, N. Mycoreovirus 1 S4-coded protein is dispensable for viral replication but necessary for efficient vertical transmission and normal symptom induction. Virology 397, 399-408.(cover featuring)

Kim, J. Y., Jung, H. J., Lee, H. J., Maruyama, K., Suzuki, N., and Kang, H. 2010. Over expression of microRNA395c and 395e affects differently the seed germination of Arabidopsis thaliana under stress conditions. Planta 232, 1447-1454.

Kondo, H., Gara., I.W., Maeda, T., Maruyama, K., Matsumoto, J., Inouye, N. and Suzuki, N. 2010.Molecular and phylogenetic analyses of the coat protein gene of orchid-infecting potyviruses in Japan. Proceedings of Nagoya International Orchid Congress, NIOC 2010 p10-15 (NIOC Prize )


2009
Chiba, S, Salaipeth L, Lin YH, Sasaki A, Kanematsu S and Suzuki N. 2009. A novel bipartite dsRNA mycovirus from the white root rot fungus Rosellinia necatrix: Molecular and biological characterization, taxonomic considerations, and potential for biological control. Journal of Virology 83: 12801-12812. (SPOTLIGHT)

Guo LH, Sun L, Chiba S, Araki H, Suzuki N. 2009. Coupled termination/reinitiation for translation of the downstream open reading frame B of the prototypic hypovirus CHV1-EP713. Nucleic Acids Research 37: 3645-3659

Ghabrial, S. A. and Suzuki, N. 2009. Viruses of plant pathogenic fungi. Annual Review of Phytopathology 47: 353-384

 
Eusebio-Cope, A, Suzuki, N. Sadeghi-Garmaroodi, H and Taga, M. 2009. Cytological and electrophoretic karyotyping of the chestnut blight fungus Cryphonectria parasitica. Fungal Genetics and Biology 46:342-351 (cover featuring)

Kondo, H., Maeda, T. and Tamada, T.2009. Identification and characterization of structural proteins of orchid fleck virus. Archives of Virology 154: 37-45

Kondo, H., Gara, I.W., Maeda, T.,Maruyama, K., Matsumoto, J., Inouye, N. and Suzuki, N. 2009. Molecular and phylogenetic analyses of the coat protein gene of orchid-infecting potyviruses in Japan. Proceedings of NIOC 2010 p10-15

Nakakihara, E., Kondo, H., Nakashima, S. and Ezaki, B. 2009. Role of N-terminal His-rich domain of Oscillatoria brevis Bxa1 in both Ag(I)/Cu(I) and Cd(II)/Zn(II) tolerance. The Open Microbiology Journal 3: pp.15

Andika, I.B., Rahim, M. D., Kondo, H. and Tamada, T. 2009. Evidence that beet necrotic yellow vein virus has an enhanced activity of RNA silencing suppression in roots. Proc. 7th Symposium of the International Working Group on Plant Viruses with Fungal Vectors (IWGPVFV)pp.17−21.

Tamada, T., Andika, I. B. Chiba, S. Miyanishi, M. Han C. G. and Kondo H. 2009. Geographical variation, virulence and short-term evolution of beet necrotic yellow vein virus. Proc. 7th Symp. IWGPVFV pp.22−25.


2008
Sun, L. and Suzuki, N. 2008. Intragenic rearrangement of a mycoreovirus induced by the RNA silencing suppressor p29 encoded by the prototypic hypovirus CHV1-EP713. RNA 14: 2557-2571

Faruk, M. I., Eusebio-Cope, A. and Suzuki N. 2008. A host factor involved in hypovirus symptom expression in the chestnut blight fungus, Cryphonectria parasitica. Journal of Virology 82: 740-754


Faruk, M. I. Izumimoto, M. and Suzuki, N. 2008. Characterization of mutants of the chestnut blight fungus (Cryphonectria parasitica) with unusual hypovirus symptoms. Journal of General Plant Pathology 74: 425-433(cover featuring)

Ghabrial, S. and Suzuki, N. 2008. Fungal virology. In: Encyclopedia of Virology 3rd Edition, B May and M Van Regenmortel (eds.). Elsevier, New York, London, Tokyo pp284-291

Chiba S, Miyanishi M, Andika IB, Kondo H, Tamada T. 2008 Identification of amino acids of the beet necrotic yellow vein virus p25 protein required for induction of the resistance response in leaves of Beta vulgaris plants. Journal of General Virology 89: 1314-1323

Panda ,K.S., Yamamoto, Y., Kondo, H. and Matsumoto, H. 2008. Mitochondrial alterations related to programmed cell death in tobacco cells under aluminium stress. Comptes Rendus Biologies 331: 597-610.

Tani, A., Inoue, C., Tanaka Y., Yamamoto, Y., Kondo, H., Hiradate, S., Kimbara, K., Kawai, F. 2008. The crucial role of mitochondrial regulation in adaptive aluminum resistance in Rhodotorula glutinis. Microbiology 154: 3437-3446


2007
Supyani, S., Hillman, B. I. and Suzuki, N. 2007. Baculovirus expression of all the Mycoreovirus 1 genome segments and identification of the guanylyltransferase-encoding segment. Journal of General Virology 88: 342-350

Rahim, M. D. Andika, I. B. Han, C. Kondo H. and Tamada T. 2007. RNA4-encoded p31 of beet necrotic yellow vein virus is involved in efficient vector transmission,symptom severity and silencing suppression in roots. Journal of General Virology 88: 2413-2419


2006
Sun, L.., Nuss, D. and Suzuk,i N. 2006. Synergism between a mycoreovirus and a hypovirus mediated by the papain-like protease p29 of the prototypic hypovirus CHV1-EP713. Journal of General Virology 87:3703-3714

Wei, T., Kikuchi, A., Moriyasu, Y., Suzuki, N., Shimizu, T., Hagiwara, K., Chen, H., Takahashi, M., Ichiki-Uehara, T. and Omura, T. 2006. The spread of Rice dwarf virus among cells of its insect vector exploits virus-induced tubular structures. Journal of Virology 80: 8593-8602

Wei, T., Kikuchi, A., Suzuki, N., Shimizu, T., Hagiwara, K., Chen, H. and Omura, T. 2006. Pns4 of rice dwarf virus is a phosphoprotein, is localized around the viroplasm matrix, and forms minitubules. Archives of Virology 151:1701-1712

Wei, T., Shimizu, T., Hagiwara, K., Kikuchi , A., Moriyasu, Y., Suzuki, N., Chen, H., and Omura, T. 2006. Viroplasms are the putative sites where Rice dwarf virus morphogenesis occurs. Journal of General Virology 87: 429-438.

Kondo, H., Maeda, T., Shirako, Y. and Tamada, T. 2006. Orchid fleck virus is a rhabdovirus with an unusual bipartite genome. Journal of General Virology 87: 2413-2421.

Andika, I. B., Kondo, H. Rahim, M. D, and Tamada, T. 2006. Lower levels of transgene silencing in roots is associated with reduced DNA methylation levels at non-symmetrical sites but not at symmetrical sites. Plant Molecular Biology 60:423-435.


 

 

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