Research

Group of Genome Diversity

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Faculty staff

Prof. Dr. Kazuhiro SATO
E-mail: kazsatoATokayama-u.ac.jp
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Assoc. Prof. Dr. Daisuke SAISHO
E-mail: saishoATokayama-u.ac.jp
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Assoc. Prof. Dr. Hiroshi HISANO
E-mail: hiroshi.hisanoATokayama-u.ac.jp
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Lecture: Plant Diversity Genetics, Diversity Analysis of Plant Genomes
Keywords: Barley; Database; Genome diversity; World barley seed collection


Summary of main research topics

Analysis and application of genome diversity in barley genetic resources
Our group conducts research on the analysis and application of genome diversity using ca. 15,000 accessions of barleys with special reference to East Asian landraces including experimental lines and wild relatives. The subjects of our research are (1) Evaluation of barley genetic resources and genome diversity, (2) Generation and application of information and resources on the barley genome, (3) Analysis of industrially important traits in barley. In addition to seed samples of accessions, cDNA and BAC clones (including individual clones, pooled BAC DNA for screening, high-density replica membranes and complete clone set of barley) were distributed worldwide with the support of the National BioResource Project.
挿入図

Latest publications (for complete and most current publications visit group pages)

(1) Hori, K., Saisho, D., Nagata, K., Nonoue, Y., Uehara-Yamaguchi, Y., Kanatani, A., Shu, K., Hirayama, T., Yonemaru, J., Fukuoka, S. and Mochida, K. Genetic Elucidation for Response of Flowering Time to Ambient Temperatures in Asian Rice Cultivars. International Journal of Molecular Sciences 22 (3): 1024. DOI: 10.3390/ijms22031024 (2021. 1.)
(2) 安倍史高・佐藤和広 穂発芽耐性コムギの開発.ゲノム編集食品 (田部井豊監修).エヌ・ティー・エス,東京,pp.175-183. (2021. 2.)
(3) Liu, Y., Luo, W., Linghu, Q., Abe, F., Hisano, H., Sato, K., Kamiya, Y., Kawamura, K., Onishi, K., Endo, M., Toki, S., Hamada, H., Nagira, Y., Taoka, N. and Imai, R. In planta genome editing in commercial wheat varieties. Front. Plant Sci. 12: 648841. DOI: 10.3389/fpls.2021.648841 (2021. 3.)
(4) 佐藤和広 醸造用大麦のゲノム解析.醸造の事典 (北本勝ひこ他編)ISBN 97842544312544 (2021. 6.)
(5) Sato, K., Abe, F., Mascher, M., Haberer, G., Gundlach, H., Spannagl, M., Shirasawa, K. and Isobe, S. Chromosome-scale genome assembly of the transformation-amenable common wheat cultivar ʻFielderʼ. DNA Res. 28 (3): dsab008. DOI: 10.1093/dnares/dsab008 (2021. 6.)
(6) Hoffie, R. E., Otto, I., Hisano, H. and Kumlehn, J. Site-Directed Mutagenesis in Barley Using RNA-Guided Cas Endonucleases During Microspore-Derived Generation of Doubled Haploids. In: Segui-Simarro J.M. (eds) Doubled Haploid Technology. Methods in Molecular Biology, vol 2287. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-1315-3_9 (2021.7.)
(7) Sato, K., Yoshida, K. and Takumi, S. RNA-Seq-based DNA marker analysis of the genetics and molecular evolution of Triticeae species. Funct. Integr. Genomics 21: 535-542. https://doi.org/10.1007/s10142-021-00799-4 (2021. 8.)
(8) Yaeno, T., Wahara, M., Nagano, M., Wanezaki, H., Toda, H., Inoue, H., Eishima, A., Nishiguchi, M., Hisano, H., Kobayashi, K., Sato, K. and Yamaoka, N. RACE1, a Japanese Blumeria graminis f. sp. hordei isolate, is capable of overcoming the mlo-mediated penetration resistance in barley. PLOS ONE 16 (8): e0256574. https://doi.org/10.1371/journal.pone.0256574 (2021. 8.)
(9) Kondo, H., Yoshida, N., Fujita, M., Maruyama, K., Hyodo, K., Hisano, H., Tamada, T., Andika, I. B. and Suzuki, N. Identification of a novel Quinvirus in the family Betaflexiviridae that infects winter wheat. Front. Microbiol. 12:715545. https://doi.org/10.3389/fmicb.2021.715545 (2021.8.)
(10) 佐藤和広 栽培植物の起源と進化.植物育種学 (奥本員敏編) ISBN 9784254405712 (2021. 8)
(11) Sato, K., Takeda, K. and Ma, J. F. Germplasm evaluation for crop improvement: Analysis of grain quality and cadmium accumulation in barley. J. Cereal Sci. 101: 103297. https://doi.org/10.1016/j.jcs.2021.103297 (2021. 9.)
(12) Almerekova, S., Genievskaya, Y., Abugalieva, S., Sato, K. and Turuspekov, Y. Phylogenetic assessment and genetic diversity of two-rowed barley accessions from Kazakhstan based on SNP genotyping data. Plants 10 (10): 2025. https://doi.org/10.3390/plants10102025 (2021. 9.)
(13) Sato, K., Mascher, M., Himmelbach, A., Haberer, G., Spannagl, M. and Stein, N. Chromosome-scale assembly of wild barley accession ʻOUH602ʼ. G3 Genes|Genomes|Genetics 11 (10): jkab244. 10.1093/g3journal/jkab244 (2021. 10.)
(14) Hisano, H., Abe, F., Hoffie, R. E. and Kumlehn, J. Targeted genome modifications in cereal crops. Breeding Sci. 71: 405-416. https://doi.org/10.1270/jsbbs.21019 (2021. 10.)
(15) Zhang, J., Matsuo, T., Hamasaki, I. and Sato, K. Whole Exome-Sequencing of Pooled Genomic DNA Samples to Detect Quantitative Trait Loci in Esotropia and Exotropia of Strabismus in Japanese. Life 2022(12): 41. (2021. 12.)
(16) Hisano, H., Hoffie, R. E., Abe, F., Munemori, H., Matsuura, T., Endo, M., Mikami, M., Nakamura, S., Kumlehn, J. and Sato, K. Regulation of germination by targeted mutagenesis of grain dormancy genes in barley. Plant Biotechnol. J. https://doi.org/10.1111/pbi.13692 (2021. 8. Online preview)


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